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C-alpha file format
Reseek supports a new format called binary C-alpha.
This is compressed
C-alpha format
, giving the smallest file size and fastest load time.
Binary C-alpha files are roughly 3x smaller than C-alpha.
Video talks
on 16S data analysis posted.
URMAP
ultra-fast read mapper posted (
paper)
.
~20% of taxonomy annotations in SILVA and Greengenes are wrong (
paper
).
Taxonomy prediction is <50% accurate for 16S V4 sequences (
paper
).
97% OTU threshold is wrong for species, should be 99% for full-length 16S, 100% V4 (
paper
).