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USEARCH v11
 New in v11 

tabbed2otutab command

Converts tabbed text file to an OTU table.

Each line in the tabbed text file contains two fields: #1. SeqLabel, #2. OTUlabel.

The SeqLabel field must contain a sample name.

The -output optoin specifies the OTU table filename.

Example

usearch -tabbed2otutab hits.txt -output otutab.txt