Sequence database search
makeudb_sintax Make UDB database file for sintax
makeudb_ublast Make UDB database file for ublast
makeudb_usearch Make UDB database file for usearch_global
search_exact Search for identical sequences
search_global Search database using global alignment without speed heuristics
search_local Search database using locbal alignment without speed heuristics
search_oligodb Search for matches to short nucleotide sequences, e.g. primers
search_pcr In-silico PCR, search for matches to pairs of primers in database
search_pcr2 In-silico PCR, search for matches to primer pair
search_peptidedb Search for matches to short peptide sequences
search_phix Search for matches to PhiX sequence
ublast Fast database search using local alignment (much faster than BLAST)
usearch_global Fast database search using global alignment
usearch_local Fast database search using local alignment