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userout option

The userout option specifies a tabbed text output file with field names specified by the - userfields option . For example, the following will give the same output as - blast6out hits.m8:

usearch -ublast reads.fastq -db proteins.fa -evalue 0.01 -userout hits.m8
-userfields query+target+id+alnlen+mism+opens+qlo+qhi+tlo+thi+evalue+bits

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