Singleton-free estimator (FE)
See also
Alpha diversity
Alpha diversity metrics
Novel alpha diversity metrics
Log-normal abundance distribution
The singleton-free estimator (FE) (R.C. Edgar and H. Flyvbjerg, manuscript in preparation) estimates total richness using a non-parametric theory similar to Chao1, except that singletons are not considered. Let
N = number of observed OTUs,
n k = number of observed OTUs with abundance k .
Then FE is calculated as
FE = N - n 1 + 2n 2 3 /9n 3 2 + 2n 2 2 /3n 3 .