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Trees and distance matrixes
 
calc_distmx Calculate distance matrix
calc_distmx_smallmem Calculate distance matrix using memory-saving method
draw_tree Converts tree to human-readable text file
tree2distmx Generate distance matrix from tree
tree_cvt Convert between Newick and tabbed formats
cluster_agg  Cluster sequences and make tree
cluster_aggd  Cluster distance matrix and make tree