Home Software Services About Contact     
 
USEARCH v11
 New in v11 

subtree command

Extracts the subtree under a given node in a tree file tabbed format. See tree_cvt command for converting a Newick tree to tabbed format. The node is specified as its integer node index in the tabbed file.

The -newickout option specifies an output file in Newick format.

The -tabbedout option specifies an output file in tabbed format.

Example

usearch -subtree big.tree -node 123 -newickout sub.tree