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USEARCH
performance home page.
PDB90 Methods.
Protein
search test results on PDB90-R
UBLAST and BLASTP are compared.
UBLAST results are shown for
typical values of the
accel parameter, which the user can set to
achieve a desired trade-off between speed and sensitivity. Values of accel
range from 100% (maximum sensitivity, slower speed) to 1% (fastest
speed, lower sensitivity). Here, sensitivity is
measured using all hits rather than the top hit or top few hits.
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