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Bug |
First ver |
Fixed ver |
Description |
| |
6.0-1 |
6.0 |
6.0.175 |
This error message provoked by makeudb_ublast with
some ‑pattern options: ---Fatal error---
udbparams.cpp(147) assert failed:
m_SlotCount == DictSize
|
| |
6.0-2 |
6.0 |
6.0.175 |
sortbylength produces empty output file. Workaround is
to specify ‑minseqlength 1.
|
| |
6.0-3 |
6.0 |
6.0.184 |
Error message from Win32 or Win64 version:
xxx.DLL is missing from your computer
Here, xxx indicates the name of the DLL, which may vary.
The fix in v6.0.184 takes care of most but not all missing DLLs. Please see here
if vcomp100.dll is reported missing.
|
| |
6.0-4 |
6.0 |
6.0.184 |
Thread deadlock
problem. Hangs during "Build index" phase. Under Windows, may display:
Fatal User Error 1002: Deadlock due to omp_set_lock being
called on lock already owned by thread
|
| |
6.0-5 |
6.0 |
6.0.185 |
Crash, e.g. segfault, when using -uc output to a search
command. This happens only with -uc and only if a query has no hits (writing the
N record crashes). Work-around is to use other output file formats e.g.
-blast6out or userout.
|
| |
6.0-6 |
6.0 |
6.0.196 |
This error when using -userout and -userfields:
---Fatal error---
Invalid user field index out/0
|
| |
6.0-7 |
6.0 |
6.0.203 |
This error creating a UDB database:
---Fatal error---
Not implemented
|
| |
6.0-8 |
6.0 |
6.0.204 |
This error creating a UDB database:
---Fatal error---
udbio.cpp(43) assert failed:
m_SlotCount == 0
|
| |
6.0-9 |
6.0 |
6.0.211 |
-sizein and -sizeout don't work correcly in
cluster_smallmem and cluster_fast.
|
| |
6.0-10 |
6.0 |
6.0.229 |
This error from derep_fullseq or derep_prefix:
---Fatal error---
derepresult.cpp(353) assert failed: SeqCount2 == SeqCount - m_TooShortCount
Workaround is to use -minseqlength 1.
|
| |
6.0-11 |
6.0 |
6.0.230 |
Crash if -minsize used with -sortbysize.
|
| |
6.0-12 |
6.0 |
6.0.230 |
Incorrect consensus sequence produced by -consout if
‑sizein used and size=n; of centroid has n>255.
|
| |
6.0-13 |
6.0 |
6.0.267 |
uchime_ref ignored -strand both so would search only on
plus strand. Work-around is to create a database with reference sequences on
both strands, i.e. both the original and reverse-completed sequences.
|
| |
6.0-14 |
6.0.?? |
6.0.267 |
This error when using -uc option with a derep command.
---Fatal error---
Output option not supported
|
| |
6.0-15 |
6.0 |
6.0.284 |
This error from the 64-bit version when reading a FASTA
file between 2Gb and 4Gb in size: ---Fatal
error---
Invalid byte 0x02x in FASTA file (null)
|
| |
6.0-16 |
6.0 |
|
Several accept options not correctly implemented in
cluster_fast, including query_cov, target_cov and the length ratio options maxsl
etc. Work-around is to use cluster_smallmem.
|
| |
6.0-17 |
6.0 |
6.1 |
This error using -consout or -msaout:
---Fatal error---
profile.cpp(249) assert failed:
MaxCount != 0
|
| |
6.0-18 |
6.0 |
6.1.509 |
Empty sequence in FASTA input file may cause crash without
error message, e.g. Floating point exception.
|
| |
6.0-19 |
6.0 |
|
Nucleotide search with -strand both fails if the database
uses the RNA alphabet rather than the DNA alphabet, i.e. uses T instead of U.
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